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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs76744797 chr7:56056185 T/C 1.6E-10 406 15.3 16.08 7.8 KM Plot
LGG rs76795274 chr20:3348493 C/G 1.08E-7 405 15.95 11.55 6.83 KM Plot
LGG rs76802349 chr7:150733271 T/C 0.00016 405 15.33 14.37 8.97 KM Plot
LGG rs7685123 chr4:84435105 G/T 1.22E-15 396 14.92 18.07 5.17 KM Plot
LGG rs76869074 chr7:55891988 A/C 0 404 15.18 16.23 3.77 KM Plot
LGG rs7688183 chr4:108919720 T/C 3.61E-5 406 4.35 14.93 15.6 KM Plot
LGG rs7690306 chr4:863917 A/G 0 404 15.57 13.67 0.23 KM Plot
LGG rs76906458 chr5:156024774 AG/A 0.000116 407 16.73 14.37 10.7 KM Plot
LGG rs76971107 chr3:153669417 T/C 0 407 15.17 16.47 0.23 KM Plot
LGG rs7697252 chr4:856580 G/T 0 402 15.6 14.43 0.23 KM Plot
LGG rs76994453 chr7:55941468 A/G 6.73E-5 405 15.25 15.37 5.88 KM Plot
LGG rs77033817 chr2:60600421 C/T 3.44E-5 395 15.27 17.82 8.03 KM Plot
LGG rs77054168 chr4:84429206 G/A 1.22E-15 396 14.92 18.07 5.17 KM Plot
LGG rs7706946 chr5:156008163 G/A 9.02E-6 406 16.3 14.15 15.37 KM Plot
LGG rs77081211 chr5:156030042 AGT/A 1.64E-5 407 16.45 14.37 10.53 KM Plot